STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLMAPSarcolemmal membrane-associated protein isoform X3. (804 aa)    
Predicted Functional Partners:
PDCD10
Programmed cell death protein 10.
   
 
 0.937
FGFR1OP2
FGFR1 oncogene partner 2 isoform X1.
    
 
 0.896
HSPE1-MOB4
MOB-like protein phocein.
    
 
 0.858
ENSSCAP00000000236
annotation not available
    
 
 0.823
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.760
STRIP1
LOW QUALITY PROTEIN: striatin-interacting protein 1.
    
 
 0.758
STRIP2
Striatin interacting protein 2.
    
 
 0.758
PPP2CB
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.
    
 0.716
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
 0.716
STK25
Serine/threonine-protein kinase 24/25/MST4.
    
 
 0.679
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.