Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TMEM38ATrimeric intracellular cation channel type A isoform X1. (294 aa)    
Predicted Functional Partners:
DOK2
LOW QUALITY PROTEIN: docking protein 2.
    
   0.826
KLHL31
Kelch-like protein 31.
   
  
 0.714
RHBDD1
Rhomboid domain-containing protein 1.
      
 0.688
PLPP7
Inactive phospholipid phosphatase 7.
   
  
 0.645
RPL3L
Ribosomal protein L3 like.
   
  
 0.623
DHRS7
Dehydrogenase/reductase SDR family member 7.
   
  
 0.613
SMIM7
Small integral membrane protein 7.
      
 0.612
TMEM70
LOW QUALITY PROTEIN: transmembrane protein 70, mitochondrial.
      
 0.610
TMEM171
Transmembrane protein 171.
      
 0.603
TMEM154
Transmembrane protein 154 isoform X1.
      
 0.600
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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