STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP300Cilia- and flagella-associated protein 300. (236 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2 isoform X1.
    
  0.601
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
 0.584
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.579
SPAG1
Sperm associated antigen 1.
    
 0.547
CFAP298
Cilia- and flagella-associated protein 298.
    
 
 0.543
DNAAF5
Dynein assembly factor 5, axonemal.
    
 
 0.543
LATS2
Serine/threonine-protein kinase LATS1/2.
    
 0.504
LATS1
Serine/threonine-protein kinase LATS1 isoform X2.
    
 0.504
PIH1D3
PIH1 domain containing 3.
    
 
 0.475
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
 0.468
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.