STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP77Cilia- and flagella-associated protein 77. (302 aa)    
Predicted Functional Partners:
C5orf49
Uncharacterized protein C5orf49 homolog.
   
   0.545
CUNH9orf116
LOW QUALITY PROTEIN: UPF0691 protein C9orf116 homolog.
   
   0.538
EFHB
EF-hand domain-containing family member B.
   
   0.538
EFHC2
EF-hand domain-containing family member C2 isoform X1.
   
   0.530
ENKUR
Enkurin.
   
   0.523
LOC103818980
Sperm acrosome-associated protein 9 isoform X1.
   
 
 0.521
LOC103819135
Sperm acrosome-associated protein 9-like.
   
 
 0.521
TEKT1
Tektin-1 isoform X1.
   
   0.521
TEKT2
Tektin-2 isoform X1.
   
   0.521
PACRG
Parkin coregulated gene protein isoform X1.
   
   0.521
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.