STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSUN5Probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X1. (425 aa)    
Predicted Functional Partners:
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 0.759
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.751
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.747
GTPBP4
Nucleolar GTP-binding protein 1.
   
 0.738
RPF1
Ribosome production factor 1.
   
 0.735
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.729
P2RY1
P2Y purinoceptor 1.
   
  0.728
WDR12
Ribosome biogenesis protein WDR12.
   
 0.727
NOC3L
Nucleolar complex protein 3 homolog.
   
 0.714
BRIX1
Ribosome biogenesis protein BRX1 homolog.
   
 0.713
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.