Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DNASE1L3Deoxyribonuclease-1-like protein. (309 aa)    
Predicted Functional Partners:
SPCS2
Signal peptidase complex subunit 2.
    
 
 0.846
SPCS1
Signal peptidase complex subunit 1.
    
   0.839
SLC25A21
Solute carrier family 25 (mitochondrial 2-oxodicarboxylate transporter), member 21.
    
   0.553
TBX20
T-box transcription factor TBX20.
    
   0.544
PRR5
Proline-rich protein 5 isoform X1.
      
 0.528
CYB5D2
Cytochrome b5 domain containing 2.
      
 0.501
ANAPC16
Anaphase-promoting complex subunit 16.
      
 0.501
TM4SF1
Transmembrane 4 L6 family member 1.
   
  
 0.500
WIPF1
WAS/WASL-interacting protein family member 1.
    
   0.494
NFASC
Neurofascin isoform X1.
      
 0.471
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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