STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGAVIntegrin alpha V. (1035 aa)    
Predicted Functional Partners:
ITGB3
Integrin beta-3 isoform X1.
   
 0.999
ITGB8
Integrin beta-8 isoform X1.
    
 0.999
ITGB5
Integrin beta 5.
   
 0.998
ITGB6
Integrin beta 6.
   
 0.997
ITGB1
Integrin beta-1 isoform X1.
   
 0.994
VTN
Vitronectin.
   
 0.984
SPP1
Secreted phosphoprotein 1.
   
 0.976
ITGB4
Integrin subunit beta 4.
   
 0.974
IBSP
Integrin binding sialoprotein.
     
 0.972
TNC
LOW QUALITY PROTEIN: tenascin.
    
 0.956
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.