Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MSI1RNA-binding protein Musashi homolog 1. (300 aa)    
Predicted Functional Partners:
DAZAP1
DAZ associated protein 1.
     
0.912
CSTF3
Cleavage stimulation factor subunit 3.
   
 
 0.659
ZC3H14
Zinc finger CCCH domain-containing protein 14.
    
 
 0.645
CSTF2
Cleavage stimulation factor subunit 2 isoform X1.
  
 
 0.572
NOVA1
RNA-binding protein Nova-1.
    
 
 0.567
CELF6-2
CUGBP Elav-like family member 6 isoform X1.
  
 
 
 0.545
RANBP1
Ran-specific GTPase-activating protein.
   
  
 0.540
RNF185
E3 ubiquitin-protein ligase RNF185.
      
 0.516
NOG
Noggin.
      
 0.513
TRA2A
Transformer-2 protein homolog alpha isoform X1.
  
 
 0.503
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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