close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD1Bromodomain-containing protein 1 isoform X2. (1186 aa)    
Predicted Functional Partners:
MEAF6
Smad nuclear-interacting protein 1.
    
 0.948
KAT7
Lysine acetyltransferase 7.
   
 0.931
ING4
Inhibitor of growth protein 4.
    
 0.926
BRPF3
Bromodomain and PHD finger-containing protein 3.
  
0.908
BRPF1
Bromodomain and PHD finger-containing protein 1.
  
0.841
KAT6B
Lysine acetyltransferase 6B.
   
 0.803
KAT6A
Histone acetyltransferase KAT6A.
   
 0.803
PHF14
LOW QUALITY PROTEIN: PHD finger protein 14.
   
 
0.697
SAMD13
Sterile alpha motif domain-containing protein 13.
    
 0.672
TCF20
Transcription factor 20 isoform X1.
   
 
 0.671
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.