STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAM8ADAM metallopeptidase domain 8. (570 aa)    
Predicted Functional Partners:
LGI1
Leucine-rich glioma-inactivated protein 1 isoform X1.
   
 0.476
ZNF511
Zinc finger protein 511.
      
 0.472
DOCK8
Dedicator of cytokinesis protein 8 isoform X1.
   
  
 0.447
VSIG4
V-set and immunoglobulin domain-containing protein 4.
      
 0.427
LGI2
Leucine-rich repeat LGI family member 2.
     
 0.418
ITGB3
Integrin beta-3 isoform X1.
   
 0.414
CHIA
Acidic mammalian chitinase-like.
   
 
 0.404
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.