STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103823413Heterogeneous nuclear ribonucleoprotein K-like isoform X2. (441 aa)    
Predicted Functional Partners:
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3 isoform X1.
   
 0.966
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.965
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform X1.
  
  
 
0.900
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.789
DESI1
Desumoylating isopeptidase 1 isoform X2.
    
   0.784
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L-like.
   
 0.765
ENSSCAP00000001280
annotation not available
   
 0.753
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.742
TRA2B
Transformer-2 protein homolog beta isoform X2.
   
 0.680
HNRNPA0
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A0.
   
 0.680
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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