STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BASP1Brain abundant membrane attached signal protein 1. (243 aa)    
Predicted Functional Partners:
GPS1
COP9 signalosome complex subunit 1.
    
  0.731
COPS4
COP9 signalosome complex subunit 4.
    
  0.729
COPS5
COP9 signalosome complex subunit 5.
    
  0.728
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
    
  0.727
TMOD1
Tropomodulin-1 isoform X1.
    
  0.726
COPS8
COP9 signalosome complex subunit 8.
    
  0.721
HSPA5
Endoplasmic reticulum chaperone BiP.
    
 0.721
LOC103818037
Dynein light chain 1, cytoplasmic.
    
  0.571
GAP43
Neuromodulin.
      
 0.538
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
    
  0.517
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.