STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MFNGBeta-1,3-N-acetylglucosaminyltransferase manic fringe isoform X4. (359 aa)    
Predicted Functional Partners:
NOTCH2
Neurogenic locus notch homolog protein 2.
    
 0.914
NOTCH1
Neurogenic locus notch homolog protein 1 isoform X1.
    
 0.913
LFNG
LOW QUALITY PROTEIN: beta-1,3-N-acetylglucosaminyltransferase lunatic fringe.
  
  
 
0.903
RFNG
Beta-1,3-N-acetylglucosaminyltransferase radical fringe.
  
  
 
0.903
NELFB
Negative elongation factor B.
   
 0.659
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.558
POLR2H
DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1.
    
  0.552
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
    
  0.505
POLR2I
DNA-directed RNA polymerase II subunit RPB9 isoform X1.
    
  0.503
POLR2K
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.500
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.