STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDXPLOW QUALITY PROTEIN: pyridoxal phosphate phosphatase. (82 aa)    
Predicted Functional Partners:
AOX1
Aldehyde oxidase isoform X1.
     
  0.900
PDXK
Pyridoxine kinase.
     
  0.900
PHOSPHO2
Pyridoxal phosphate phosphatase PHOSPHO2.
     
  0.900
EXOC7
Exocyst complex component 7 isoform X5.
     
 0.611
EXOC8
Exocyst complex component 8.
    
 0.592
EXOC4
Exocyst complex component 4.
     
 0.558
SH3BP1
LOW QUALITY PROTEIN: SH3 domain-binding protein 1.
 
      0.501
MYRIP
Myosin VIIA and Rab interacting protein.
   
 
  0.471
ARHGAP44
Rho GTPase activating protein 44.
 
  
   0.409
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.