Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HSPB8Heat shock protein beta-8. (200 aa)    
Predicted Functional Partners:
BAG3
BAG family molecular chaperone regulator 3.
   
 0.995
HSPB7
Heat shock protein beta-7.
   
 
 0.939
HSPB1
Heat shock protein beta-1.
   
 
 0.746
HSPB3
Heat shock protein beta-3.
   
 
 0.715
DNAJB13
DnaJ homolog subfamily B member 13.
   
 0.677
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.668
HSPA8
Heat shock cognate 71 kDa protein.
   
 0.648
HSP90AA1
Heat shock protein HSP 90-alpha.
   
 0.627
HSP90AB1
Heat shock protein HSP 90-beta isoform X1.
   
 0.627
COX4I1
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
      
 0.613
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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