STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCTN6Dynactin subunit 6. (150 aa)    
Predicted Functional Partners:
DCTN4
Dynactin subunit 4 isoform X1.
    
 0.999
DCTN5
Dynactin subunit 5.
   
 0.998
ACTR10
Actin-related protein 10.
   
 0.992
DCTN3
Dynactin subunit 3.
    
 0.992
DCTN2
Dynactin subunit 2.
    
 0.989
ENSSCAP00000020467
Dynactin subunit 1-like.
    
 0.977
ACTR1A
Alpha-centractin.
    
 0.946
DYNC1LI2
Cytoplasmic dynein 1 light intermediate chain 2.
    
 0.934
CAPZB
Capping protein (actin filament) muscle Z-line, beta.
    
 0.928
DYNC1H1
Cytoplasmic dynein 1 heavy chain 1.
    
 0.912
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.