STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2E2Transcription initiation factor TFIIE subunit beta. (291 aa)    
Predicted Functional Partners:
GTF2E1
Transcription initiation factor TFIIE subunit alpha.
   
 0.999
LOC103826203
Transcription initiation factor TFIIE subunit alpha.
   
 0.981
ERCC3
General transcription and DNA repair factor IIH helicase subunit XPB.
    
 0.970
GTF2A1
Transcription initiation factor TFIIA large subunit.
    
 0.969
GTF2A2
Transcription initiation factor TFIIA small subunit.
   
 0.969
MNAT1
CDK-activating kinase assembly factor MAT1.
   
 0.965
GTF2H2
General transcription factor IIH subunit 2 isoform X1.
   
 0.965
GTF2F2
General transcription factor IIF subunit 2.
   
 0.964
GTF2H3
Transcription initiation factor TFIIH subunit 3.
    
 0.957
GTF2B
Transcription initiation factor IIB isoform X1.
    
 0.954
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.