STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1-0Histone H1/5. (202 aa)    
Predicted Functional Partners:
CDK1
Cyclin-dependent kinase 1.
   
 0.944
ENSSCAP00000000624
annotation not available
   
 0.849
CDK3
Cyclin-dependent kinase 3.
   
 0.849
H2AZ1
Histone H2A.Z isoform X1.
   
 
 0.702
H2AZ2
Histone H2A.V.
   
 
 0.702
H1-10
H1.10 linker histone.
   
 
 0.691
CDK6
Cyclin-dependent kinase 6.
   
 0.613
DFFB
DNA fragmentation factor, 40 kD, beta subunit.
    
 0.604
ENSSCAP00000021666
annotation not available
    
 0.604
ACTL6A
Actin-like protein 6A.
    
 
 0.582
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.