Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VSIG10V-set and immunoglobulin domain containing 10. (496 aa)    
Predicted Functional Partners:
LRRC73
Leucine-rich repeat-containing protein 73.
      
 0.703
ANKRD13D
Ankyrin repeat domain 13D.
      
 0.695
TEPSIN
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.683
TTC17
Tetratricopeptide repeat protein 17.
      
 0.682
LYPLAL1
Lysophospholipase-like protein 1.
      
 0.606
MCOLN2
Mucolipin-2 isoform X1.
    
 
 0.605
POLR3D
DNA-directed RNA polymerase III subunit RPC4 isoform X1.
      
 0.599
RANBP2
RAN binding protein 2.
   
 
  0.530
SLC39A6
Solute carrier family 39 (zinc transporter), member 6.
      
 0.528
SHQ1
Protein SHQ1 homolog isoform X1.
      
 0.528
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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