STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPCN1Two pore calcium channel protein 1 isoform X2. (813 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.986
CD38
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X1.
     
  0.900
RYR2
Ryanodine receptor 2.
   
 0.735
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2 isoform X4.
   
 0.726
WDR35
WD repeat-containing protein 35 isoform X1.
    
 0.587
IFT122
Intraflagellar transport 122.
   
 0.573
SCN2B
Voltage-gated sodium channel type II beta.
   
 0.565
IFT140
Intraflagellar transport protein 140 homolog isoform X1.
    
 0.555
WDR19
WD repeat-containing protein 19.
    
 0.555
CACNA2D1
Voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1.
   
 0.551
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.