STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACADLLong-chain specific acyl-CoA dehydrogenase, mitochondrial. (431 aa)    
Predicted Functional Partners:
HADHB
Trifunctional enzyme subunit beta, mitochondrial.
  
 0.974
HADHA
Enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase.
  
 0.972
ACAA1
LOW QUALITY PROTEIN: 3-ketoacyl-CoA thiolase, peroxisomal.
  
 0.970
ACAA2
3-ketoacyl-CoA thiolase, mitochondrial.
  
 0.962
ECHS1
Enoyl-CoA hydratase, mitochondrial.
  
 0.957
EHHADH
Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase.
  
 0.957
CPT2
Carnitine O-palmitoyltransferase 2, mitochondrial.
   
 0.951
ACADM
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1.
  
0.945
ACOX3
Peroxisomal acyl-coenzyme A oxidase 3 isoform X1.
     
 0.944
ACOX1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
   
 
 0.936
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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