Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CWF19L2CWF19-like protein 2. (907 aa)    
Predicted Functional Partners:
SYF2
Pre-mRNA-splicing factor SYF2.
    
 0.975
TFIP11
Tuftelin-interacting protein 11.
   
  0.968
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43.
    
 0.961
CCDC12
Coiled-coil domain-containing protein 12.
    
 0.961
CDC40
Pre-mRNA-processing factor 17.
   
 0.956
PPIL1
Peptidyl-prolyl cis-trans isomerase-like 1.
    
  0.934
CWF19L1
CWF19-like protein 1.
    
0.925
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.905
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.898
GCFC2
GC-rich sequence DNA-binding factor 2.
   
  0.894
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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