STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXOSC2Exosome complex component RRP4. (294 aa)    
Predicted Functional Partners:
EXOSC9
Exosome complex component RRP45.
   
 0.999
EXOSC7
Exosome complex component RRP42.
   
 0.999
EXOSC3
Exosome component 3.
   
 0.999
EXOSC10
Exosome complex exonuclease RRP6.
   
 0.999
DIS3L
DIS3-like exonuclease 1 isoform X2.
   
 0.999
EXOSC8
Exosome complex component RRP43.
   
 0.999
DIS3
Exosome complex exonuclease DIS3/RRP44.
   
 0.999
EXOSC1
Exosome complex component CSL4 isoform X1.
   
 0.999
C1D
Nuclear nucleic acid-binding protein C1D.
   
 0.998
MTREX
Exosome RNA helicase MTR4 isoform X1.
   
 0.997
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.