STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000005681annotation not available (141 aa)    
Predicted Functional Partners:
PLAT
Tissue-type plasminogen activator isoform X1.
    
  0.770
ENSSCAP00000012593
annotation not available
    
   0.741
CD79B
B-cell antigen receptor complex-associated protein beta chain.
   
 0.701
ENSSCAP00000017575
annotation not available
   
 0.638
LOC103813616
Tumor necrosis factor receptor superfamily member 13C-like.
   
 
 0.632
IL6
Interleukin 6.
    
 0.589
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.588
ENSSCAP00000017593
annotation not available
  
 0.577
APP
Amyloid-beta precursor protein isoform X1.
    
  0.575
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
   0.574
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.