Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABCA12LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 12. (3038 aa)    
Predicted Functional Partners:
LOC103824481
ATP-binding cassette, subfamily F, member 2.
      
 0.529
SLCO3A1
LOW QUALITY PROTEIN: solute carrier organic anion transporter family member 3A1.
      
 0.528
ABCD4
ATP-binding cassette sub-family D member 4 isoform X1.
      
 0.527
ABCC2
Canalicular multispecific organic anion transporter 1 isoform X1.
  
 0.517
RPL19
Large subunit ribosomal protein L19e.
   
  
 0.500
INTS13
Integrator complex subunit 13.
      
 0.494
SPATS2L
SPATS2-like protein.
      
 0.492
RSBN1L
Lysine-specific demethylase RSBN1L.
      
 0.492
MOCOS
Molybdenum cofactor sulfurase isoform X1.
     
 0.487
SLC35F1
Solute carrier family 35, member F1/2.
   
 
 0.485
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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