Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000005705Fibrinogen-like protein 1-like protein. (278 aa)    
Predicted Functional Partners:
SVEP1
CUB and sushi domain-containing protein.
    
 0.786
ENSSCAP00000017574
annotation not available
  
 
  0.541
EGFLAM
Pikachurin isoform X1.
    
 0.501
SDC3
Syndecan 3.
     
  0.492
ENSSCAP00000000476
annotation not available
    
 0.468
ENSSCAP00000000489
annotation not available
    
 0.468
ENSSCAP00000000495
LOW QUALITY PROTEIN: CMRF35-like molecule 3.
    
 0.468
GPLD1
Phosphatidylinositol-glycan-specific phospholipase D isoform X1.
    
 0.468
ITGA4
Integrin subunit alpha 4.
    
 0.468
ITGAV
Integrin alpha V.
    
 0.468
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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