STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TANC1Protein TANC1 isoform X1. (1829 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase 6 catalytic subunit.
    
 0.558
RGS7BP
Regulator of G-protein signaling 7-binding protein isoform X2.
      
 0.538
SBK1
Serine/threonine-protein kinase SBK1.
      
 0.516
HTR3A
5-hydroxytryptamine receptor 3A-like.
      
 0.515
AGAP1
LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1.
    
 0.504
AGAP3
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11.
    
 0.504
RIOK3
Serine/threonine-protein kinase RIO3.
    
 
 0.483
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X2.
    
 0.435
ENSSCAP00000002215
annotation not available
    
 0.425
PPP6R3
Serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1.
    
 0.425
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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