STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGRMC2Membrane-associated progesterone receptor component 2. (177 aa)    
Predicted Functional Partners:
FDX1
Ferredoxin-1, mitochondrial.
   
  
 0.822
ATAD3A
ATPase family AAA domain-containing protein 3A/B.
      
 0.813
CETP
Cholesteryl ester transfer protein.
      
 0.812
AQP4
Aquaporin-4 isoform X1.
    
 
 0.763
OTX2
Homeobox protein OTX2 isoform X1.
      
 0.761
GPER1
G-protein coupled estrogen receptor 1.
      
 0.761
STAR
Steroidogenic acute regulatory protein.
      
 0.754
GFAP
Glial fibrillary acidic protein.
    
 
 0.700
PGR
LOW QUALITY PROTEIN: progesterone receptor.
      
 0.690
PM20D2
Peptidase M20 domain-containing protein 2.
     
 0.545
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.