STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCKDHB2-oxoisovalerate dehydrogenase subunit beta, mitochondrial. (358 aa)    
Predicted Functional Partners:
BCKDHA
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial.
 
 0.999
DBT
2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase).
 
 0.998
DLD
Dihydrolipoyl dehydrogenase, mitochondrial.
  
 0.996
PDHA1
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial.
 
 0.991
BCAT1
Branched-chain-amino-acid aminotransferase, cytosolic isoform X1.
  
 0.989
DLST
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
 
 0.968
PDHX
Dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex.
 
 0.938
DLAT
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.933
LDHA
L-lactate dehydrogenase A chain.
  
 0.929
LDHB
L-lactate dehydrogenase B chain isoform X1.
  
 0.929
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.