STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSSC4Protein TSSC4 isoform X1. (347 aa)    
Predicted Functional Partners:
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.909
SNRNP200
LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.864
SNRNP40
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 
 0.739
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 
 0.706
ECD
LOW QUALITY PROTEIN: protein ecdysoneless homolog.
    
 
 0.653
EAPP
E2F-associated phosphoprotein.
    
 
 0.636
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B.
   
 
 0.623
ASCC3
Activating signal cointegrator 1 complex subunit 3 isoform X1.
    
 
 0.581
PHLDA2
Pleckstrin homology-like domain family A member 2.
      
 0.538
OSBPL5
Oxysterol-binding protein-related protein 5 isoform X1.
      
 0.527
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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