Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDF2L1Stromal cell derived factor 2 like 1. (196 aa)    
Predicted Functional Partners:
DNAJB11
DnaJ homolog subfamily B member 11.
   
 0.882
DNAJC10
DnaJ homolog subfamily C member 10.
   
 0.801
HSPA5
Endoplasmic reticulum chaperone BiP.
   
 0.716
SNX1
Sorting nexin-1/2.
    
 
 0.683
SPAG1
Sperm associated antigen 1.
     
 0.663
CRELD2
Cysteine-rich with EGF-like domain protein 2.
   
 
 0.607
HYOU1
Hypoxia up-regulated protein 1.
   
 0.597
RRAGB
Ras-related GTP-binding protein A/B.
      
 0.543
VDAC1
Voltage-dependent anion-selective channel protein 1.
    
 
 0.531
ENSSCAP00000002133
ENHANCER OF AG-4 protein 2-like.
   
 
 0.530
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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