STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF2L1Stromal cell derived factor 2 like 1. (196 aa)    
Predicted Functional Partners:
DNAJC10
DnaJ homolog subfamily C member 10.
   
 0.972
BAG3
BAG family molecular chaperone regulator 3.
    
 0.918
DNAJB11
DnaJ homolog subfamily B member 11.
   
 0.814
HSPA5
Endoplasmic reticulum chaperone BiP.
   
 0.702
HSP90B1
Heat shock protein 90kDa beta.
   
 0.683
SPAG1
Sperm associated antigen 1.
     
 0.666
HYOU1
Hypoxia up-regulated protein 1.
   
 0.666
DAG1
Dystroglycan 1.
    
 0.611
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.595
DNAJC9
DnaJ homolog subfamily C member 9.
    
 0.569
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.