STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPNS3MFS transporter, Spinster family, sphingosine-1-phosphate transporter. (498 aa)    
Predicted Functional Partners:
MFSD11
UNC93-like protein MFSD11.
      
 0.613
MFSD13A
Major facilitator superfamily domain containing 13A.
      
 0.606
MFSD9
Major facilitator superfamily domain-containing protein 9.
   
  
 0.599
SVOPL
Putative transporter SVOPL isoform X3.
      
 0.585
MFSD10
Major facilitator superfamily domain-containing protein 10.
   
  
 0.551
MFSD2B
Major facilitator superfamily domain-containing protein 2B.
    
 0.538
MFSD6
Major facilitator superfamily domain-containing protein 6 isoform X1.
   
  
 0.530
UNC93A
Protein unc-93 homolog A isoform X1.
      
 0.528
SVOP
Synaptic vesicle 2-related protein isoform X2.
      
 0.528
SLC44A1
Solute carrier family 44 (choline transporter-like protein), member 1.
      
 0.528
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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