STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GNB1LGuanine nucleotide-binding protein subunit beta-like protein 1 isoform X5. (373 aa)    
Predicted Functional Partners:
TTI1
TELO2-interacting protein 1 homolog.
    
 0.915
RUVBL1
RuvB-like protein 1 (pontin 52).
   
 0.907
RUVBL2
RuvB-like protein 2.
   
 
 0.902
TELO2
Telomere length regulation protein TEL2 homolog isoform X3.
    
 0.868
TRRAP
Transformation/transcription domain-associated protein.
    
 0.655
ENSSCAP00000013684
annotation not available
    
 0.655
WDR12
Ribosome biogenesis protein WDR12.
  
 
 0.638
JAGN1
Protein jagunal homolog 1.
      
 0.624
PWP2
Periodic tryptophan protein 2 homolog.
   
 
0.602
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.587
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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