STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCMT1[phosphatase 2A protein]-leucine-carboxy methyltransferase. (234 aa)    
Predicted Functional Partners:
PPP2CB
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.
    
 0.905
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
 0.905
ENSSCAP00000000236
annotation not available
    
 0.833
PTPA
Serine/threonine-protein phosphatase 2A activator isoform X1.
    
 
 0.788
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
 0.770
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
 0.770
PPME1
Protein phosphatase methylesterase 1 isoform X1.
      
 0.683
PPP4C
Protein phosphatase 4 catalytic subunit.
    
 0.675
ENSSCAP00000021882
Serine/threonine-protein phosphatase 4 catalytic subunit-like.
    
 0.675
IGBP1
Immunoglobulin-binding protein 1.
   
 
 0.661
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.