Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRD7Bromodomain-containing protein 7. (684 aa)    
Predicted Functional Partners:
PHF10
PHD finger protein 10.
    
 0.989
ARID2
AT-rich interactive domain-containing protein 2.
   
 0.988
PBRM1
Protein polybromo-1 isoform X1.
   
 0.984
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
   
 0.981
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 0.977
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
    
 0.967
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 0.962
NUP50
Nuclear pore complex protein Nup50.
    
 
 0.943
ACTL6A
Actin-like protein 6A.
   
 0.918
EP300
Histone acetyltransferase p300.
   
 0.904
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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