STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABTB1Ankyrin repeat and BTB/POZ domain-containing protein 1. (463 aa)    
Predicted Functional Partners:
EEF1D
Eukaryotic translation elongation factor 1 delta.
    
   0.565
IBTK
Inhibitor of Bruton tyrosine kinase isoform X2.
    
 0.548
WDYHV1
Protein N-terminal glutamine amidohydrolase isoform X1.
    
 
 0.542
CUL3
Cullin 3.
   
 0.528
CACUL1
CDK2-associated and cullin domain-containing protein 1 isoform X1.
   
 0.528
CUL1
Cullin-1 isoform X1.
   
 0.528
CARS1
Cysteine--tRNA ligase, cytoplasmic isoform X1.
    
   0.493
OGDH
2-oxoglutarate dehydrogenase, mitochondrial isoform X1.
    
 
 0.469
ELOC
Elongin-C.
    
 0.465
AP4B1
LOW QUALITY PROTEIN: AP-4 complex subunit beta-1.
    
 0.444
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.