STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RANBP1Ran-specific GTPase-activating protein. (205 aa)    
Predicted Functional Partners:
ADGRD1
LOW QUALITY PROTEIN: adhesion G-protein coupled receptor D1.
   
 0.962
RANGAP1
Ran GTPase-activating protein 1.
   
 0.959
RAN
GTP-binding nuclear protein Ran.
   
 0.959
XPO1
Exportin-1.
   
 
 0.959
CHADL
Chondroadherin-like protein.
   
 0.937
NUP93
Nuclear pore complex protein Nup93 isoform X3.
   
 0.899
NUP155
Nuclear pore complex protein Nup155.
   
 0.896
NUP54
Nuclear pore complex protein Nup54.
   
 0.873
NUP107
Nuclear pore complex protein Nup107.
   
 0.872
NUP214
Nucleoporin 214.
   
 0.870
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.