STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM20Small integral membrane protein 20. (62 aa)    
Predicted Functional Partners:
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
 0.862
TNNI2
Troponin I, fast skeletal muscle isoform X1.
   
 0.858
TNNI1
Troponin I, slow skeletal muscle.
   
 0.858
TNNC2
Troponin C, skeletal muscle.
   
 0.842
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.777
TPM2
Tropomyosin 2.
   
 0.727
TPM3
Tropomyosin alpha-3 chain isoform X9.
   
 0.727
TPM4
Tropomyosin alpha-4 chain isoform X2.
   
 0.727
TPM1
Tropomyosin 1.
   
 0.727
ENSSCAP00000000349
Myocardial zonula adherens protein-like isoform X1.
   
 0.654
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.