STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRKBEKC/KEOPS complex subunit CGI121/TPRKB. (238 aa)    
Predicted Functional Partners:
TP53RK
TP53 regulating kinase and related kinases.
   
 0.999
OSGEP
O-sialoglycoprotein endopeptidase.
    
 0.998
OSGEPL1
Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial.
    
 0.963
GNL2
Nucleolar GTP-binding protein 2.
      
 0.624
YRDC
YrdC domain-containing protein, mitochondrial.
      
 0.511
LOC103816492
Uncharacterized protein LOC103816492.
      
 0.511
NUP43
Nucleoporin 43.
    
   0.493
NET1
Neuroepithelial cell-transforming gene 1 protein isoform X1.
      
 0.474
ENSSCAP00000002502
annotation not available
      
 0.471
ENSSCAP00000023533
annotation not available
      
 0.471
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.