STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMOD2Tropomodulin-2. (351 aa)    
Predicted Functional Partners:
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
 
 0.696
NEB
Nebulin.
   
 0.689
ACTB
Actin, cytoplasmic 1.
    
 0.527
TNNI1
Troponin I, slow skeletal muscle.
   
 
 0.506
TNNI2
Troponin I, fast skeletal muscle isoform X1.
   
 
 0.500
VCL
Vinculin isoform X2.
   
 
 0.486
GPS1
COP9 signalosome complex subunit 1.
    
  0.459
COPS3
COP9 signalosome complex subunit 3.
    
  0.454
ENSSCAP00000001003
annotation not available
   
 
 0.453
ACTN2
Actinin alpha 2/3.
   
 
 0.453
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.