STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF20Ring finger protein 20. (936 aa)    
Predicted Functional Partners:
UBE2V1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 variant 1.
     
 0.974
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
   
 0.972
UBE2B
Ubiquitin-conjugating enzyme E2 B.
    
 0.842
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 0.842
CDC73
Parafibromin.
   
 0.777
WAC
WW domain-containing adapter protein with coiled-coil isoform X1.
   
 0.763
CTR9
RNA polymerase-associated protein CTR9 homolog.
   
 0.722
TRIP12
E3 ubiquitin-protein ligase TRIP12 isoform X4.
   
  
 0.710
SETD2
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
   
 
 0.694
UBE2N
Ubiquitin-conjugating enzyme E2 N.
    
 0.681
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.