STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A2Solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2. (629 aa)    
Predicted Functional Partners:
SNCA
Alpha-synuclein.
   
 
 0.745
CTNNB1
Catenin beta 1.
   
 
 0.728
NFATC2
Nuclear factor of activated T-cells, cytoplasmic 2 isoform X3.
      
 0.723
CLPTM1L
Cleft lip and palate transmembrane protein 1-like protein.
      
 0.590
LPCAT1
Lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase.
      
 0.555
DBH
Dopamine beta-hydroxylase isoform X1.
   
  
 0.544
FOXC1
LOW QUALITY PROTEIN: forkhead box protein C1.
   
  
 0.540
TH
Tyrosine 3-monooxygenase.
   
  
 0.537
FLOT2
Flotillin-2 isoform X1.
     
 0.536
FLOT1
Flotillin-1.
     
 0.536
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.