STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALDOBAldolase, fructose-bisphosphate B. (402 aa)    
Predicted Functional Partners:
GAPDH
Glyceraldehyde 3-phosphate dehydrogenase.
  
 0.932
TPI1
Triosephosphate isomerase 1.
  
 0.911
TKT
Transketolase.
  
 0.888
GPI
Glucose-6-phosphate isomerase.
   
 0.802
PGK1
Phosphoglycerate kinase 1.
  
 0.755
PYGB
Glycogen phosphorylase, brain form.
  
 
 0.746
H6PD
GDH/6PGL endoplasmic bifunctional protein.
   
  
 0.691
HIF1A
Hypoxia-inducible factor 1-alpha isoform X2.
      
 0.690
MYCBPAP
MYCBP associated protein.
  
 0.690
FBP1
Fructose-1,6-bisphosphatase 1.
  
 0.689
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.