STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL5039S ribosomal protein L50, mitochondrial isoform X1. (137 aa)    
Predicted Functional Partners:
MRPL51
39S ribosomal protein L51, mitochondrial.
   
 
 0.931
MRPL53
39S ribosomal protein L53, mitochondrial.
   
 
 0.924
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 
 0.899
MRPL44
LOW QUALITY PROTEIN: 39S ribosomal protein L44, mitochondrial.
   
 
 0.896
MRPL39
39S ribosomal protein L39, mitochondrial.
   
 
 0.895
MRPL30
39S ribosomal protein L30, mitochondrial isoform X1.
   
 
 0.895
MRPL32
39S ribosomal protein L32, mitochondrial.
   
   0.893
MRPL20
39S ribosomal protein L20, mitochondrial.
   
 
 0.889
MRPS18A
39S ribosomal protein S18a, mitochondrial.
   
 
 0.886
MRPS18C
28S ribosomal protein S18c, mitochondrial.
   
 
 0.886
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.