Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLPPR1Lipid phosphate phosphatase-related protein type 1/2/5. (325 aa)    
Predicted Functional Partners:
STXBP3
Syntaxin-binding protein 3 isoform X1.
    
   0.826
MED20
Mediator of RNA polymerase II transcription subunit 20.
    
 0.778
MED14
Mediator of RNA polymerase II transcription subunit 14.
    
 0.778
MED4
Mediator of RNA polymerase II transcription subunit 4.
    
 0.778
MED6
Mediator of RNA polymerase II transcription subunit 6.
    
 0.777
MED10
Mediator of RNA polymerase II transcription subunit 10.
    
 0.776
MED23
Mediator of RNA polymerase II transcription subunit 23 isoform X1.
   
 0.774
MED7
Mediator of RNA polymerase II transcription subunit 7.
   
 0.774
MRPL50
39S ribosomal protein L50, mitochondrial isoform X1.
      
 0.769
MED15
Mediator complex subunit 15.
    
 0.747
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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