STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTY2D1Protein SPT2 homolog. (722 aa)    
Predicted Functional Partners:
ENSSCAP00000006380
annotation not available
      
 0.681
ENSSCAP00000005536
annotation not available
      
 0.537
GOSR1
Golgi SNAP receptor complex member 1 isoform X1.
   
 0.486
USO1
General vesicular transport factor p115 isoform X1.
   
 0.484
GOLGA2
Golgin subfamily A member 2 isoform X1.
   
 
 0.480
MRPL40
39S ribosomal protein L40, mitochondrial.
      
 0.475
IFT20
Intraflagellar transport 20.
   
 0.471
TUBG1
Tubulin gamma-1 chain.
    
 0.447
TUBGCP3
Gamma-tubulin complex component 3.
    
 0.441
GAK
Cyclin-G-associated kinase isoform X1.
    
 0.440
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.