STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC24A5Solute carrier family 24 (sodium/potassium/calcium exchanger), member 5. (423 aa)    
Predicted Functional Partners:
SLC45A2
Membrane-associated transporter protein isoform X2.
   
  
 0.708
OCA2
P protein.
  
  
 0.685
MITF
Melanocyte inducing transcription factor.
      
 0.623
TYRP1
LOW QUALITY PROTEIN: 5,6-dihydroxyindole-2-carboxylic acid oxidase.
   
  
 0.611
TYR
Tyrosinase.
   
  
 0.609
KIT
Proto-oncogene tyrosine-protein kinase Kit.
   
  
 0.546
TPCN2
Two pore segment channel 2.
   
  
 0.541
EDAR
Tumor necrosis factor receptor superfamily member EDAR isoform X1.
      
 0.538
ENSSCAP00000000635
annotation not available
      
 0.513
SLC45A1
Proton-associated sugar transporter A isoform X1.
   
  
 0.494
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.