STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGGF1Angiogenic factor with G patch and FHA domains 1 isoform X1. (657 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein 6.
   
 0.628
BYSL
Bystin like.
    
 0.613
RRP36
Ribosomal RNA processing protein 36 homolog.
   
  0.612
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
    
  0.610
NOP14
Nucleolar protein 14.
    
  0.594
DDX10
Probable ATP-dependent RNA helicase DDX10.
    
 0.589
RSL1D1
Ribosomal L1 domain-containing protein 1.
    
 0.571
UTP6
U3 small nucleolar RNA-associated protein 6 homolog.
   
 0.571
COPRS
Coordinator of PRMT5 and differentiation stimulator isoform X1.
   
 0.571
DDX18
ATP-dependent RNA helicase DDX18/HAS1.
    
  0.565
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.