Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDH7Protocadherin 7. (1068 aa)    
Predicted Functional Partners:
PCDH20
LOW QUALITY PROTEIN: protocadherin-20.
   
  0.839
GALM
Aldose 1-epimerase.
      
 0.685
TAF1
Transcription initiation factor TFIID subunit 1 isoform X1.
      
 0.613
GTPBP1
GTP-binding protein 1 isoform X1.
      
 0.605
CCKAR
Cholecystokinin receptor type A.
     
 0.529
UGT8
2-hydroxyacylsphingosine 1-beta-galactosyltransferase.
      
 0.528
ITGB3
Integrin beta-3 isoform X1.
    
 0.494
VRK2
Serine/threonine-protein kinase VRK2 isoform X2.
     
 0.482
THSD7A
Thrombospondin type-1 domain-containing protein 7A isoform X1.
    
 
 0.471
UNC5C
Netrin receptor UNC5C isoform X1.
      
 0.470
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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