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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NECAB2N-terminal EF-hand calcium-binding protein 2 isoform X1. (258 aa)    
Predicted Functional Partners:
HTR1B
LOW QUALITY PROTEIN: 5-hydroxytryptamine receptor 1B.
   
 0.810
SV2B
MFS transporter, VNT family, synaptic vesicle glycoprotein 2.
    
 0.804
CRHR2
Corticotropin releasing hormone receptor 2.
   
 
 0.800
ESR1
LOW QUALITY PROTEIN: estrogen receptor.
    
 0.800
CYP19A1
Aromatase.
   
 0.797
SEMA6A
LOW QUALITY PROTEIN: semaphorin-6A.
     
 0.797
MGP
Matrix Gla protein.
      
 0.796
ZBTB20
Zinc finger and BTB domain-containing protein 20.
    
 0.773
PLPP4
Diacylglycerol diphosphate phosphatase / phosphatidate phosphatase.
    
 
 0.705
SCUBE1
Signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1.
      
 0.697
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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